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  5. Aev_g13891

Aev_g13891 (CAMTA3, SR1)


Aliases : CAMTA3, SR1

Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g13891

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00085730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.CAMTA... 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00052450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.CAMTA... 0.02 OrthoFinder output from all 47 species
Ala_g13747 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69874.t1 CAMTA3, SR1,... CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10434871g0010 No alias transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species
Ore_g35915 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19783 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo441667 CAMTA3, SR1 RNA biosynthesis.transcriptional activation.CAMTA... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR005559 CG-1_dom 24 137
IPR002909 IPT_dom 608 685
IPR000048 IQ_motif_EF-hand-BS 1054 1073
IPR000048 IQ_motif_EF-hand-BS 1031 1049
No external refs found!