Aev_g13808 (MED34, ATRECQ2, RECQL2)

Aliases : MED34, ATRECQ2, RECQL2

Description : component *(MED34) of MEDIATOR transcription co-activator complex & original description: none

Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g13808
Cluster	HCCA: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
Ala_g10518	MED34, ATRECQ2, RECQL2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g06356	MED34, ATRECQ2, RECQL2	component *(MED34) of MEDIATOR transcription...	0.03	OrthoFinder output from all 47 species
Mp4g16510.1	RECQI1	ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e016051_P001	RecQl3, ATRECQ3,...	ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002121	HRDC_dom	616	680
IPR018982	RQC_domain	485	592
IPR011545	DEAD/DEAH_box_helicase_dom	95	261
IPR032284	RecQ_Zn-bd	422	477
IPR001650	Helicase_C	304	409

External Links

No external refs found!