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  5. Aev_g13780

Aev_g13780 (FAS4, ATFAS4)


Aliases : FAS4, ATFAS4

Description : not classified & original description: none


Gene families : OG0005211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g13780

Target Alias Description ECC score Gene Family Method Actions
AT1G33390 FAS4, ATFAS4 RNA helicase family protein 0.02 OrthoFinder output from all 47 species
Ehy_g19341 FAS4, ATFAS4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028054001 FAS4, ATFAS4 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Lfl_g27239 FAS4, ATFAS4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09770 FAS4, ATFAS4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015757_P002 FAS4, ATFAS4,... ATP-dependent RNA helicase DEAH13 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 944 1078
IPR001650 Helicase_C 793 882
IPR011545 DEAD/DEAH_box_helicase_dom 372 552
IPR011709 DEAD-box_helicase_OB_fold 1169 1258
No external refs found!