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  5. Ppi_g57988

Ppi_g57988


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g57988
Cluster HCCA: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00224090 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
Aspi01Gene18482.t1 Aspi01Gene18482 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019563001 No alias B2 protein OS=Daucus carota 0.02 OrthoFinder output from all 47 species
LOC_Os05g51590.1 LOC_Os05g51590 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 248.0) 0.04 OrthoFinder output from all 47 species
Len_g04611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g082610.4.1 Solyc08g082610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 303.0) 0.04 OrthoFinder output from all 47 species
Solyc10g076330.3.1 Solyc10g076330 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 118.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 143 268
No external refs found!