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  5. Ppi_g57518

Ppi_g57518


Description : not classified & original description: none


Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g57518

Target Alias Description ECC score Gene Family Method Actions
AT2G40400 No alias Protein of unknown function (DUF399 and DUF3411) 0.04 OrthoFinder output from all 47 species
Aev_g02433 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g27723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23936 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g34117 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g01529 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g04442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010109 No alias not classified & original description: CDS=336-1601 0.02 OrthoFinder output from all 47 species
Cba_g03217 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g11392 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.22G078500.1 Ceric.22G078500 not classified & original description: pacid=50614469... 0.07 OrthoFinder output from all 47 species
Ceric.29G029100.1 Ceric.29G029100 not classified & original description: pacid=50624979... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021617.18 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g18040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032197001 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os01g61120.1 LOC_Os01g61120 Protein RETICULATA-RELATED 6, chloroplastic... 0.08 OrthoFinder output from all 47 species
Len_g11651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12361 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g15648 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g02954 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g11767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20912 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g37256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g07921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012218 No alias not classified & original description: CDS=101-1345 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012586 No alias not classified & original description: CDS=235-2685 0.03 OrthoFinder output from all 47 species
Sam_g08338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22685 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo177305 No alias Protein RETICULATA-RELATED 5, chloroplastic... 0.04 OrthoFinder output from all 47 species
Smo71514 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc01g087750.4.1 Solyc01g087750 Protein RETICULATA-RELATED 4, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g07578 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g52655 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13626 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018574_P001 Zm00001e018574 Protein RETICULATA-RELATED 4, chloroplastic... 0.03 OrthoFinder output from all 47 species
Zm00001e019415_P003 Zm00001e019415 Protein RETICULATA-RELATED 6, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 198 375
No external refs found!