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  5. Ppi_g57412

Ppi_g57412 (emb2726)


Aliases : emb2726

Description : not classified & original description: none


Gene families : OG0003614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g57412
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
Adi_g072355 emb2726 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089954 emb2726 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Adi_g108527 emb2726 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g19464 emb2726 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g26890 emb2726 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g17834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05824 emb2726 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49195.t1 emb2726, Aspi01Gene49195 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63156.t1 emb2726, Aspi01Gene63156 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0113.g045909 emb2726 not classified & original description: CDS=1-1431 0.07 OrthoFinder output from all 47 species
Cba_g23205 emb2726 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.32G048200.1 emb2726, Ceric.32G048200 not classified & original description: pacid=50597994... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021464.7 emb2726 No description available 0.02 OrthoFinder output from all 47 species
Dac_g28821 emb2726 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g48945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22164 emb2726 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22898 emb2726 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g27297 emb2726 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g01159 emb2726 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08036 emb2726 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g04910 emb2726 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g10331 emb2726 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02523 emb2726 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65444 emb2726 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000982 emb2726 not classified & original description: CDS=1-1401 0.05 OrthoFinder output from all 47 species
Sam_g36866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10898 emb2726 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g14739 emb2726 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08220 emb2726 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20885 emb2726 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 159 226
IPR003029 S1_domain 279 343
No external refs found!