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  5. Ppi_g56898

Ppi_g56898


Description : not classified & original description: none


Gene families : OG0004428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g56898

Target Alias Description ECC score Gene Family Method Actions
AT2G34357 No alias ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g05537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11874 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.18G047800.1 Ceric.18G047800 not classified & original description: pacid=50622555... 0.02 OrthoFinder output from all 47 species
Dde_g08172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433024g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g16187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR012978 RRP12-like_dom 406 607
No external refs found!