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  5. Zm00001d033319

Zm00001d033319 (GRMZM2G366373)


Aliases : GRMZM2G366373

Description : 27.3.40 RNA.regulation of transcription.Aux/IAA family SHY2/IAA3 regulates multiple auxin responses in roots. It is induced rapidly by IAA, and has been shown to be phosphorylated by oat phytochrome A in vitro. SHORT HYPOCOTYL 2 (SHY2)


Gene families : OG_01_0000182 (Gene family) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d033319
Cluster HCCA cluster: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT1G15580 ATAUX2-27, AUX2-27, IAA5 indole-3-acetic acid inducible 5 0.03 Gene family
AT3G04730 IAA16 indoleacetic acid-induced protein 16 0.04 Gene family
AT3G23050 AXR2, IAA7 indole-3-acetic acid 7 0.03 Gene family
AT4G14560 IAA1, AXR5 indole-3-acetic acid inducible 0.02 Gene family
AT4G29080 IAA27, PAP2 phytochrome-associated protein 2 0.03 Gene family
LOC_Os03g53150 Os03g0742900 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.04 Gene family
LOC_Os12g40890 Os12g0601300 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.04 Gene family
LOC_Os12g40900 Os12g0601400 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.07 Gene family
Smo85035 PACid_15416929 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
Solyc04g054280.2.1 Solyc04g054280.2 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.03 Gene family
Solyc06g008580.3.1 Solyc06g008580.3 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
Solyc06g053830.3.1 Solyc06g053830.3 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.04 Gene family
Solyc09g083280.3.1 Solyc09g083280.3 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
Zm00001d009532 GRMZM2G573324 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.03 Gene family
Zm00001d013071 GRMZM2G152796 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
Zm00001d018973 GRMZM2G115357 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 11 170
IPR033389 AUX/IAA_dom 175 219
No external refs found!