Zm00001d033319 (GRMZM2G366373)


Aliases : GRMZM2G366373

Description : 27.3.40 RNA.regulation of transcription.Aux/IAA family SHY2/IAA3 regulates multiple auxin responses in roots. It is induced rapidly by IAA, and has been shown to be phosphorylated by oat phytochrome A in vitro. SHORT HYPOCOTYL 2 (SHY2)


Gene families : OG_01_0000182 (Gene family) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d033319
Cluster HCCA cluster: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT1G15580 ATAUX2-27, AUX2-27, IAA5 indole-3-acetic acid inducible 5 0.03 Gene family
AT3G04730 IAA16 indoleacetic acid-induced protein 16 0.04 Gene family
AT3G23050 AXR2, IAA7 indole-3-acetic acid 7 0.03 Gene family
AT4G14560 IAA1, AXR5 indole-3-acetic acid inducible 0.02 Gene family
AT4G29080 IAA27, PAP2 phytochrome-associated protein 2 0.03 Gene family
LOC_Os03g53150 Os03g0742900 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.04 Gene family
LOC_Os12g40890 Os12g0601300 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.04 Gene family
LOC_Os12g40900 Os12g0601400 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.07 Gene family
Smo85035 PACid_15416929 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
Solyc04g054280.2.1 Solyc04g054280.2 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.03 Gene family
Solyc06g008580.3.1 Solyc06g008580.3 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
Solyc06g053830.3.1 Solyc06g053830.3 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.04 Gene family
Solyc09g083280.3.1 Solyc09g083280.3 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
Zm00001d009532 GRMZM2G573324 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.03 Gene family
Zm00001d013071 GRMZM2G152796 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
Zm00001d018973 GRMZM2G115357 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 11 170
IPR033389 AUX/IAA_dom 175 219
No external refs found!