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  5. Ppi_g56809

Ppi_g56809 (EMB86, EMB1030, EMB263)


Aliases : EMB86, EMB1030, EMB263

Description : not classified & original description: none


Gene families : OG0001528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g56809

Target Alias Description ECC score Gene Family Method Actions
AT5G22800 EMB86, EMB1030, EMB263 Alanyl-tRNA synthetase, class IIc 0.04 OrthoFinder output from all 47 species
Aev_g15227 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.06 OrthoFinder output from all 47 species
Als_g05106 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Aob_g06066 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.06 OrthoFinder output from all 47 species
Aop_g08353 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene12706.t1 EMB86, EMB1030,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12707.t1 EMB86, EMB1030,... EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Cba_g14026 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.1 OrthoFinder output from all 47 species
Ceric.20G012400.1 EMB86, EMB1030,... EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Dac_g09278 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.08 OrthoFinder output from all 47 species
Dde_g11577 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.09 OrthoFinder output from all 47 species
Ehy_g20259 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01023918001 EMB86, EMB1030, EMB263 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder output from all 47 species
Gb_36215 EMB86, EMB1030, EMB263 alanine-tRNA ligase 0.04 OrthoFinder output from all 47 species
LOC_Os06g13660.1 EMB86, EMB1030,... alanine-tRNA ligase 0.08 OrthoFinder output from all 47 species
Len_g17359 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.1 OrthoFinder output from all 47 species
Lfl_g12875 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Msp_g25185 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Nbi_g21729 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Ore_g08778 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Pnu_g26458 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017335 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Sam_g26484 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Solyc01g111990.3.1 EMB86, EMB1030,... alanine-tRNA ligase 0.08 OrthoFinder output from all 47 species
Spa_g39932 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.09 OrthoFinder output from all 47 species
Tin_g43549 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Zm00001e036036_P002 EMB86, EMB1030,... alanine-tRNA ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012947 tRNA_SAD 50 93
IPR003156 DHHA1_dom 132 270
No external refs found!