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  5. Ppi_g56546

Ppi_g56546


Description : not classified & original description: none


Gene families : OG0003000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g56546
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00042590 evm_27.TU.AmTr_v1... Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.02 OrthoFinder output from all 47 species
AT3G22490 No alias Seed maturation protein 0.04 OrthoFinder output from all 47 species
AT3G22500 ATECP31 Seed maturation protein 0.04 OrthoFinder output from all 47 species
Aev_g39096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G017000.1 Ceric.07G017000 not classified & original description: pacid=50628070... 0.03 OrthoFinder output from all 47 species
Ceric.11G015400.1 Ceric.11G015400 not classified & original description: pacid=50596852... 0.03 OrthoFinder output from all 47 species
Ceric.12G023800.1 RAB28, ATRAB28,... not classified & original description: pacid=50600510... 0.04 OrthoFinder output from all 47 species
Dde_g09016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g27296 RAB28, ATRAB28 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47990 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01017985001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.02 OrthoFinder output from all 47 species
GSVIVT01021881001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.02 OrthoFinder output from all 47 species
LOC_Os03g06360.1 LOC_Os03g06360 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.03 OrthoFinder output from all 47 species
LOC_Os03g53620.1 ATECP31, LOC_Os03g53620 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g23350.1 LOC_Os06g23350 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.03 OrthoFinder output from all 47 species
LOC_Os10g29570.1 RAB28, ATRAB28,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_1400g0010 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.02 OrthoFinder output from all 47 species
MA_14118g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g18240.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g06630.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Nbi_g25972 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g14470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55933 RAB28, ATRAB28 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo84789 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc09g065360.4.1 Solyc09g065360 Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc09g082100.3.1 Solyc09g082100 Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc09g082110.4.1 Solyc09g082110 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.04 OrthoFinder output from all 47 species
Zm00001e000449_P001 Zm00001e000449 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.03 OrthoFinder output from all 47 species
Zm00001e005665_P002 Zm00001e005665 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.03 OrthoFinder output from all 47 species
Zm00001e005666_P001 Zm00001e005666 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR007011 LEA_SMP_dom 230 284
IPR007011 LEA_SMP_dom 167 218
IPR007011 LEA_SMP_dom 97 148
IPR007011 LEA_SMP_dom 346 403
IPR007011 LEA_SMP_dom 410 446
No external refs found!