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  5. Ppi_g56514

Ppi_g56514


Description : not classified & original description: none


Gene families : OG0015814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0015814_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g56514

Target Alias Description ECC score Gene Family Method Actions
Ceric.24G055600.1 Ceric.24G055600 not classified & original description: pacid=50628980... 0.06 OrthoFinder output from all 47 species
Nbi_g19476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 181 228
IPR002885 Pentatricopeptide_repeat 358 378
IPR002885 Pentatricopeptide_repeat 387 414
IPR002885 Pentatricopeptide_repeat 84 113
IPR002885 Pentatricopeptide_repeat 256 276
No external refs found!