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  5. Ppi_g56304

Ppi_g56304


Description : not classified & original description: none


Gene families : OG0000514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g56304

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00111920 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G48050 No alias BAH domain ;TFIIS helical bundle-like domain 0.02 OrthoFinder output from all 47 species
Adi_g097046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03624 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Dac_g15540 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Ehy_g00900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007806001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01009936001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os06g42490.1 LOC_Os06g42490 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_39143g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g16160.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g16230.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g04481 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Ore_g13877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06454 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005665 No alias not classified & original description: CDS=481-3921 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018052 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Smo440870 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc03g114060.3.1 Solyc03g114060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g071350.4.1 Solyc06g071350 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g13967 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Zm00001e002441_P003 Zm00001e002441 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013353_P001 Zm00001e013353 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037792_P001 Zm00001e037792 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037793_P001 Zm00001e037793 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 151 201
No external refs found!