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  5. Ppi_g56177

Ppi_g56177


Description : not classified & original description: none


Gene families : OG0003032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g56177
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Adi_g113866 APM2, PEX13 component *(Pex13) of cargo-receptor docking complex &... 0.02 OrthoFinder output from all 47 species
Dde_g26565 No alias component *(Pex13) of cargo-receptor docking complex &... 0.04 OrthoFinder output from all 47 species
Dde_g50250 No alias component *(Pex13) of cargo-receptor docking complex &... 0.04 OrthoFinder output from all 47 species
LOC_Os03g57210.1 APM2, PEX13,... component Pex13 of cargo-receptor docking complex 0.02 OrthoFinder output from all 47 species
Lfl_g04519 No alias component *(Pex13) of cargo-receptor docking complex &... 0.04 OrthoFinder output from all 47 species
Nbi_g15813 No alias component *(Pex13) of cargo-receptor docking complex &... 0.03 OrthoFinder output from all 47 species
Pir_g32360 No alias component *(Pex13) of cargo-receptor docking complex &... 0.04 OrthoFinder output from all 47 species
Pnu_g00469 APM2, PEX13 component *(Pex13) of cargo-receptor docking complex &... 0.02 OrthoFinder output from all 47 species
Smo173180 APM2, PEX13 Protein translocation.peroxisome.importomer... 0.03 OrthoFinder output from all 47 species
Tin_g36560 No alias component *(Pex13) of cargo-receptor docking complex &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!