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  5. Ppi_g55873

Ppi_g55873


Description : not classified & original description: none


Gene families : OG0000348 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g55873

Target Alias Description ECC score Gene Family Method Actions
Adi_g022974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08296.t1 Aspi01Gene08296 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11798.t3 Aspi01Gene11798 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G032100.1 Ceric.06G032100 not classified & original description: pacid=50620378... 0.02 OrthoFinder output from all 47 species
Dac_g03794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g62329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR010730 HET 109 215
No external refs found!