Ppi_g55666

Description : component *(eL42) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001983 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001983_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g55666
Cluster	HCCA: Cluster_122

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00106300	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AMTR_s00077p00123980	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
AT4G14320	No alias	Zinc-binding ribosomal protein family protein	0.03	OrthoFinder output from all 47 species
Ceric.14G031000.1	Ceric.14G031000	component *(eL42) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000489.11	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Cre06.g310700	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Dac_g46318	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Dcu_g17062	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01032097001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
MA_99845g0010	No alias	component RPL36a of LSU proteome component	0.04	OrthoFinder output from all 47 species
Msp_g06398	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Pp3c26_11220V3.1	Pp3c26_11220	Zinc-binding ribosomal protein family protein	0.04	OrthoFinder output from all 47 species
Pp3c3_10260V3.1	Pp3c3_10260	Zinc-binding ribosomal protein family protein	0.03	OrthoFinder output from all 47 species
Pp3c7_20120V3.1	Pp3c7_20120	Zinc-binding ribosomal protein family protein	0.03	OrthoFinder output from all 47 species
Ppi_g27814	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Tin_g29053	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Zm00001e010489_P002	Zm00001e010489	component RPL36a of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e033410_P001	Zm00001e033410	component RPL36a of LSU proteome component	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008430	selenium binding	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000552	Ribosomal_L44e	19	94

External Links

No external refs found!

Ppi_g55666

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation