Ppi_g54473


Description : component *(RPP2) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g54473
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT2G27710 No alias 60S acidic ribosomal protein family 0.03 OrthoFinder output from all 47 species
AT2G27720 No alias 60S acidic ribosomal protein family 0.03 OrthoFinder output from all 47 species
AT3G44590 No alias 60S acidic ribosomal protein family 0.03 OrthoFinder output from all 47 species
Ala_g18468 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Als_g24871 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g06840 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g22313 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Aop_g29386 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g71145 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aspi01Gene10073.t1 Aspi01Gene10073 component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g21272 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g28150 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.20G061600.1 Ceric.20G061600 component *(RPP2) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Cre02.g143050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
Dac_g03976 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Dac_g32367 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Dcu_g29004 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g44019 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01033814001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Gb_39007 No alias component RPP2 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os01g09510.4 LOC_Os01g09510 component RPP2 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp1g06260.1 No alias component RPP2 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Mp1g08160.1 No alias component RPP2 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Msp_g40276 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Nbi_g02818 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g21745 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c1_27060V3.1 Pp3c1_27060 60S acidic ribosomal protein family 0.03 OrthoFinder output from all 47 species
Ppi_g26787 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g27198 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g27557 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g38806 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Ppi_g38822 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g41562 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g44372 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g44489 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g50722 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Sam_g16387 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g17151 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g23353 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Sam_g38961 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g39823 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g40093 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g40309 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Smo139397 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc11g067100.2.1 Solyc11g067100 component RPP2 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Spa_g39239 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g53019 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Tin_g12451 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Tin_g19572 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Tin_g21399 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Tin_g44881 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Zm00001e006597_P001 Zm00001e006597 component RPP2 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e026591_P001 Zm00001e026591 component RPP2 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e026592_P001 Zm00001e026592 component RPP2 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e026593_P001 Zm00001e026593 component RPP2 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e041900_P001 Zm00001e041900 component RPP2 of LSU proteome component 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0001934 positive regulation of protein phosphorylation IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010562 positive regulation of phosphorus metabolic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031401 positive regulation of protein modification process IEP HCCA
BP GO:0033674 positive regulation of kinase activity IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0042327 positive regulation of phosphorylation IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0045860 positive regulation of protein kinase activity IEP HCCA
BP GO:0045937 positive regulation of phosphate metabolic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051347 positive regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0071902 positive regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904031 positive regulation of cyclin-dependent protein kinase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!