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  5. Ppi_g54414

Ppi_g54414


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g54414

Target Alias Description ECC score Gene Family Method Actions
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g014376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02454 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g14758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17536 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21667 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34015 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0251.g060280 No alias not classified & original description: CDS=1-3180 0.06 OrthoFinder output from all 47 species
Azfi_s2054.g108918 CRR22 not classified & original description: CDS=1-2412 0.06 OrthoFinder output from all 47 species
Cba_g11364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78232 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g40775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g28570.1 LOC_Os01g28570 Pentatricopeptide repeat-containing protein At3g49710... 0.07 OrthoFinder output from all 47 species
Lfl_g07116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433543g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_475393g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_482767g0010 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.06 OrthoFinder output from all 47 species
Msp_g20568 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20288 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26843 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011787 No alias not classified & original description: CDS=98-1228 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015139 No alias not classified & original description: CDS=1-852 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016469 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2448 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0232.g026457 No alias not classified & original description: CDS=1-363 0.05 OrthoFinder output from all 47 species
Sam_g26079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g43933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46731 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 694 766
IPR002885 Pentatricopeptide_repeat 366 413
IPR002885 Pentatricopeptide_repeat 265 312
IPR002885 Pentatricopeptide_repeat 467 514
IPR002885 Pentatricopeptide_repeat 164 212
IPR002885 Pentatricopeptide_repeat 542 564
No external refs found!