Zm00001d032948 (GRMZM2G162508)


Aliases : GRMZM2G162508

Description : 11.1.10 lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase Encodes KCS20, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 20 (KCS20)


Gene families : OG_01_0000104 (Gene family) Phylogenetic Tree(s): OG0000104_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d032948
Cluster HCCA cluster: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AT1G01120 KCS1 3-ketoacyl-CoA synthase 1 0.02 Gene family
AT1G04220 KCS2 3-ketoacyl-CoA synthase 2 0.04 Gene family
AT1G25450 KCS5, CER60 3-ketoacyl-CoA synthase 5 0.03 Gene family
AT1G68530 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase 6 0.08 Gene family
AT2G26250 KCS10, FDH 3-ketoacyl-CoA synthase 10 0.16 Gene family
AT5G43760 KCS20 3-ketoacyl-CoA synthase 20 0.06 Gene family
GSVIVT01013708001 No alias 11.1.10 lipid metabolism.FA synthesis and FA... 0.05 Gene family
GSVIVT01018539001 No alias 16.7 secondary metabolism.wax Encodes KCS5, a member of... 0.03 Gene family
GSVIVT01022919001 No alias 11.1.10 lipid metabolism.FA synthesis and FA... 0.02 Gene family
GSVIVT01026270001 No alias 11.1.10 lipid metabolism.FA synthesis and FA... 0.02 Gene family
GSVIVT01035504001 No alias 16.1 secondary metabolism.isoprenoids... 0.07 Gene family
LOC_Os01g34560 Os01g0529800 16.7 secondary metabolism.wax Encodes KCS6, a member of... 0.04 Gene family
LOC_Os02g49920 Os02g0731900 16.7 secondary metabolism.wax Encodes KCS6, a member of... 0.06 Gene family
LOC_Os03g08360 Os03g0181500 16.1 secondary metabolism.isoprenoids... 0.08 Gene family
LOC_Os03g12030 Os03g0220100 16.7 secondary metabolism.wax Encodes KCS6, a member of... 0.02 Gene family
LOC_Os03g14170 Os03g0245700 No description available 0.06 Gene family
LOC_Os05g49290 Os05g0568000 16.7 secondary metabolism.wax Encodes KCS4, a member of... 0.03 Gene family
LOC_Os06g14810 Os06g0260500 16.7 secondary metabolism.wax Encodes KCS6, a member of... 0.09 Gene family
LOC_Os06g15170 Os06g0262800 16.7 secondary metabolism.wax Encodes KCS6, a member of... 0.09 Gene family
LOC_Os09g19650 Os09g0360500 11.1.11 lipid metabolism.FA synthesis and FA... 0.05 Gene family
LOC_Os10g28060 Os10g0416200 11.1.10 lipid metabolism.FA synthesis and FA... 0.08 Gene family
LOC_Os11g37900 Os11g0591200 11.1.10 lipid metabolism.FA synthesis and FA... 0.05 Gene family
MA_10429708g0010 No alias 16.1 secondary metabolism.isoprenoids... 0.02 Gene family
MA_105806g0010 No alias 11.1.10 lipid metabolism.FA synthesis and FA... 0.03 Gene family
MA_11217g0010 No alias 16.7 secondary metabolism.wax Encodes KCS9, a member of... 0.02 Gene family
MA_309409g0010 No alias 16.1 secondary metabolism.isoprenoids... 0.02 Gene family
MA_339700g0010 No alias 16.7 secondary metabolism.wax Encodes KCS9, a member of... 0.03 Gene family
MA_43136g0010 No alias 11.1.10 lipid metabolism.FA synthesis and FA... 0.03 Gene family
MA_56709g0010 No alias 16.7 secondary metabolism.wax Encodes KCS4, a member of... 0.04 Gene family
Smo79947 PACid_15405940 No description available 0.03 Gene family
Solyc02g085870.3.1 Solyc02g085870.3 16.7 secondary metabolism.wax Encodes KCS6, a member of... 0.06 Gene family
Solyc03g005320.3.1 Solyc03g005320.3 11.1.10 lipid metabolism.FA synthesis and FA... 0.04 Gene family
Solyc05g009270.3.1 Solyc05g009270.3 16.7 secondary metabolism.wax Encodes KCS6, a member of... 0.03 Gene family
Solyc08g067260.3.1 Solyc08g067260.3 16.1 secondary metabolism.isoprenoids... 0.07 Gene family
Solyc09g065780.3.1 Solyc09g065780.3 11.1.10 lipid metabolism.FA synthesis and FA... 0.03 Gene family
Solyc09g083050.3.1 Solyc09g083050.3 11.1.10 lipid metabolism.FA synthesis and FA... 0.03 Gene family
Solyc10g009240.3.1 Solyc10g009240.3 No description available 0.02 Gene family
Zm00001d028241 GRMZM2G164974 16.7 secondary metabolism.wax Encodes KCS6, a member of... 0.03 Gene family
Zm00001d030343 GRMZM2G063024 No description available 0.02 Gene family
Zm00001d048061 No alias 16.7 secondary metabolism.wax Encodes KCS6, a member of... 0.05 Gene family
Zm00001d051787 GRMZM2G003501 16.7 secondary metabolism.wax Encodes KCS5, a member of... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013601 FAE1_typ3_polyketide_synth 60 348
IPR013747 ACP_syn_III_C 365 446
No external refs found!