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  5. LOC_Os12g21700.1

LOC_Os12g21700.1


Description : C3H zinc finger transcription factor


Gene families : OG_01_0000421 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000421_tree ,
OG_02_0000820 (LandPlants) Phylogenetic Tree(s): OG_02_0000820_tree ,
OG_03_0002308 (SeedPlants) Phylogenetic Tree(s): OG_03_0002308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g21700.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Pp3c26_12400V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 Archaeplastida
AMTR_s00074p00110430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 LandPlants
MA_137427g0010 No alias C3H zinc finger transcription factor 0.02 LandPlants
MA_137427g0010 No alias C3H zinc finger transcription factor 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 160 184
IPR000571 Znf_CCCH 114 138
IPR000571 Znf_CCCH 69 93
IPR000571 Znf_CCCH 320 345
IPR000571 Znf_CCCH 366 391
No external refs found!