LOC_Os12g19381.1


Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer


Gene families : OG_01_0000561 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000561_tree ,
OG_02_0000421 (LandPlants) Phylogenetic Tree(s): OG_02_0000421_tree ,
OG_03_0001423 (SeedPlants) Phylogenetic Tree(s): OG_03_0001423_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g19381.1
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00061090 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.12 Archaeplastida
AT1G67090 RBCS1A ribulose bisphosphate carboxylase small chain 1A 0.18 Archaeplastida
AT5G38410 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.13 Archaeplastida
AT5G38420 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.15 Archaeplastida
AT5G38430 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.08 Archaeplastida
Cre02.g120100 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.04 Archaeplastida
GSVIVT01008288001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.12 Archaeplastida
Gb_00380 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Archaeplastida
MA_47626g0010 No alias small subunit of ribulose-1,5-bisphosphat... 0.1 Archaeplastida
Mp4g06010.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 Archaeplastida
Mp4g06020.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 Archaeplastida
Mp4g06030.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Archaeplastida
Mp4g06050.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Archaeplastida
Mp4g10850.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.11 Archaeplastida
Mp4g15070.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Mp4g15080.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Pp3c13_15786V3.1 No alias No annotation 0.08 Archaeplastida
Pp3c13_15800V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.11 Archaeplastida
Pp3c13_15980V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.09 Archaeplastida
Pp3c13_16000V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.11 Archaeplastida
Pp3c13_16130V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.04 Archaeplastida
Pp3c3_14510V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.1 Archaeplastida
Pp3c3_18750V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.08 Archaeplastida
Pp3c3_20110V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.02 Archaeplastida
Pp3c3_20140V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.08 Archaeplastida
Smo147927 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.08 Archaeplastida
Solyc02g063150.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.11 Archaeplastida
Solyc02g085950.4.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.12 Archaeplastida
Solyc03g034220.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.09 Archaeplastida
Zm00001e009125_P001 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e024168_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
AMTR_s00079p00061090 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.09 LandPlants
AT1G67090 RBCS1A ribulose bisphosphate carboxylase small chain 1A 0.17 LandPlants
AT5G38410 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.12 LandPlants
AT5G38420 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.12 LandPlants
AT5G38430 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.07 LandPlants
GSVIVT01008288001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.13 LandPlants
Gb_00380 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 LandPlants
MA_47626g0010 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 LandPlants
Mp4g06010.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 LandPlants
Mp4g06020.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 LandPlants
Mp4g06030.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 LandPlants
Mp4g06050.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 LandPlants
Mp4g10850.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.09 LandPlants
Mp4g15070.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 LandPlants
Mp4g15080.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 LandPlants
Pp3c13_15786V3.1 No alias No annotation 0.09 LandPlants
Pp3c13_15800V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.1 LandPlants
Pp3c13_15980V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.07 LandPlants
Pp3c13_16000V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.09 LandPlants
Pp3c13_16130V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.03 LandPlants
Pp3c15_22720V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.01 LandPlants
Pp3c15_22730V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.01 LandPlants
Pp3c19_1840V3.1 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.01 LandPlants
Pp3c3_14510V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.1 LandPlants
Pp3c3_18750V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.09 LandPlants
Pp3c3_20110V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.02 LandPlants
Pp3c3_20140V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.07 LandPlants
Smo147927 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.08 LandPlants
Solyc02g063150.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.1 LandPlants
Solyc02g085950.4.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.12 LandPlants
Solyc03g034220.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.09 LandPlants
Zm00001e009125_P001 No alias no hits & (original description: none) 0.11 LandPlants
Zm00001e024168_P001 No alias no hits & (original description: none) 0.1 LandPlants
AMTR_s00079p00061090 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.09 SeedPlants
AT1G67090 RBCS1A ribulose bisphosphate carboxylase small chain 1A 0.16 SeedPlants
AT5G38410 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.12 SeedPlants
AT5G38420 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.12 SeedPlants
AT5G38430 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.07 SeedPlants
GSVIVT01008288001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.12 SeedPlants
Gb_00380 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 SeedPlants
MA_47626g0010 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 SeedPlants
Solyc02g063150.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.1 SeedPlants
Solyc02g085950.4.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.12 SeedPlants
Solyc03g034220.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.09 SeedPlants
Zm00001e009125_P001 No alias no hits & (original description: none) 0.11 SeedPlants
Zm00001e024168_P001 No alias no hits & (original description: none) 0.1 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000894 RuBisCO_sc_dom 59 166
IPR024680 RuBisCO_ssu_N 8 33
No external refs found!