Ppi_g53555


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g53555
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g022147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g033689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g104520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23888 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g05430 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07818 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18491 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g30878 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g33780 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33844 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19004 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03162 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g03547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g15417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16003 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16489 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16811 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25536 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26806 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27035 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28321 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g28530 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23472.t2 CRR22, Aspi01Gene23472 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36355.t1 Aspi01Gene36355 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G014400.1 Ceric.03G014400 not classified & original description: pacid=50572365... 0.04 OrthoFinder output from all 47 species
Ceric.09G027000.1 Ceric.09G027000 not classified & original description: pacid=50586634... 0.04 OrthoFinder output from all 47 species
Ceric.21G054700.1 CRR22, Ceric.21G054700 not classified & original description: pacid=50603698... 0.05 OrthoFinder output from all 47 species
Ceric.27G069000.1 Ceric.27G069000 not classified & original description: pacid=50605685... 0.04 OrthoFinder output from all 47 species
Ceric.28G052000.1 OTP86, Ceric.28G052000 not classified & original description: pacid=50569960... 0.06 OrthoFinder output from all 47 species
Ceric.29G078100.1 Ceric.29G078100 not classified & original description: pacid=50625063... 0.04 OrthoFinder output from all 47 species
Ceric.35G061000.1 CRR22, Ceric.35G061000 not classified & original description: pacid=50581720... 0.05 OrthoFinder output from all 47 species
Dde_g46917 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04309 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18579 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18962 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44806 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54484 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06223 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g39660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g02083 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03935 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g06015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25127 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26098 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45781 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46080 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g03782 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07805 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08399 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15172 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16442 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16805 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g27842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28139 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g03043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03367 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15249 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18087 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33469 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g34327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g45444 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60210 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55034 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009138 No alias component *(NRPC16/RPC34) of TFIIIe transcription factor... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019261 No alias not classified & original description: CDS=1-3048 0.04 OrthoFinder output from all 47 species
Sam_g02656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo11063 REME1 Pentatricopeptide repeat-containing protein At2g34400... 0.04 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.05 OrthoFinder output from all 47 species
Spa_g02187 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14171 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16206 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20297 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21107 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28099 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30016 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42473 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46731 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50886 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04082 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05979 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29866 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43987 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 412 456
IPR002885 Pentatricopeptide_repeat 103 150
IPR002885 Pentatricopeptide_repeat 613 661
IPR002885 Pentatricopeptide_repeat 205 252
IPR002885 Pentatricopeptide_repeat 511 558
IPR002885 Pentatricopeptide_repeat 307 354
IPR002885 Pentatricopeptide_repeat 5 48
IPR002885 Pentatricopeptide_repeat 588 612
No external refs found!