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  5. Ppi_g53348

Ppi_g53348


Description : not classified & original description: none


Gene families : OG0006419 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006419_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g53348

Target Alias Description ECC score Gene Family Method Actions
AT4G19190 No alias zinc knuckle (CCHC-type) family protein 0.02 OrthoFinder output from all 47 species
Aop_g03126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g40659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006359 regulation of transcription by RNA polymerase III IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0030684 preribosome IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR019339 CIR_N_dom 32 67
IPR041670 Znf-CCHC_6 182 203
No external refs found!