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  5. Ppi_g53293

Ppi_g53293


Description : not classified & original description: none


Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g53293

Target Alias Description ECC score Gene Family Method Actions
AT4G20220 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 OrthoFinder output from all 47 species
Aev_g45253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21774.t1 Aspi01Gene21774 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000641001 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Gb_30485 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Pnu_g12188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_10480V3.1 Pp3c3_10480 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!