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  5. Ppi_g53170

Ppi_g53170


Description : not classified & original description: none


Gene families : OG0003966 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0003966_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g53170
Cluster HCCA: Cluster_323

Target Alias Description ECC score Gene Family Method Actions
Len_g12939 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g14377 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Msp_g21545 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Ppi_g32866 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Ppi_g61143 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Spa_g15358 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Spa_g15589 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 133 170
IPR002885 Pentatricopeptide_repeat 29 76
IPR002885 Pentatricopeptide_repeat 3 27
No external refs found!