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  5. Ppi_g52861

Ppi_g52861 (CLPB3, CLPB-P, APG6)


Aliases : CLPB3, CLPB-P, APG6

Description : organellar chaperone *(Clp-p/Clp-m) & original description: none


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g52861

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00119290 ATHSP101, HOT1,... External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
AT1G74310 ATHSP101, HOT1, HSP101 heat shock protein 101 0.04 OrthoFinder output from all 47 species
AT2G25140 CLPB4, CLPB-M, HSP98.7 casein lytic proteinase B4 0.03 OrthoFinder output from all 47 species
AT5G15450 CLPB3, CLPB-P, APG6 casein lytic proteinase B3 0.02 OrthoFinder output from all 47 species
Aev_g01489 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g49540 CLPB3, CLPB-P, APG6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11015 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13437 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07816 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.30G013400.1 SAG15, CLPD,... chaperone component *(ClpD) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Cre11.g467644 ATHSP101, HOT1, HSP101 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Dac_g01014 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g05146 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11203 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14071 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g13807 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40536 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g14780 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04028 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29771 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007880001 ATHSP101, HOT1, HSP101 External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
GSVIVT01011496001 CLPB3, CLPB-P, APG6 External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
GSVIVT01035900001 CLPB4, CLPB-M, HSP98.7 External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Gb_21271 ATHSP101, HOT1, HSP101 cytosolic chaperone (Hsp101) 0.02 OrthoFinder output from all 47 species
LOC_Os02g08490.1 CLPB4, CLPB-M,... organellar chaperone (Clp-p|Clp-m) 0.04 OrthoFinder output from all 47 species
LOC_Os03g31300.1 CLPB3, CLPB-P,... organellar chaperone (Clp-p|Clp-m) 0.04 OrthoFinder output from all 47 species
LOC_Os05g44340.1 ATHSP101, HOT1,... cytosolic chaperone (Hsp101) 0.05 OrthoFinder output from all 47 species
MA_9843119g0010 HSP93-V, DCA1,... Chaperone protein ClpC1, chloroplastic OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Mp1g16450.1 ATHSP101, HOT1, HSP101 cytosolic chaperone (Hsp101) 0.02 OrthoFinder output from all 47 species
Nbi_g09666 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12640 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g16869 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10514 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Pp3c19_4790V3.1 ATHSP101, HOT1,... heat shock protein 101 0.01 OrthoFinder output from all 47 species
Smo170696 ATHSP101, HOT1, HSP101 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Smo174539 CLPB3, CLPB-P, APG6 External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Solyc02g088610.4.1 CLPB3, CLPB-P,... organellar chaperone (Clp-p|Clp-m) 0.03 OrthoFinder output from all 47 species
Solyc03g115230.3.1 ATHSP101, HOT1,... cytosolic chaperone (Hsp101) 0.05 OrthoFinder output from all 47 species
Solyc06g011370.4.1 CLPB4, CLPB-M,... Chaperone protein ClpB3, mitochondrial OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc06g011380.2.1 CLPB4, CLPB-M,... Chaperone protein ClpB4, mitochondrial OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc06g011400.2.1 CLPB4, CLPB-M,... Chaperone protein ClpB4, mitochondrial OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g08654 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g18896 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46726 ATHSP101, HOT1, HSP101 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g04164 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10041 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002026_P002 CLPB3, CLPB-P,... organellar chaperone (Clp-p|Clp-m) 0.04 OrthoFinder output from all 47 species
Zm00001e032223_P001 ATHSP101, HOT1,... cytosolic chaperone (Hsp101) 0.03 OrthoFinder output from all 47 species
Zm00001e038056_P001 CLPB3, CLPB-P,... organellar chaperone (Clp-p|Clp-m) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR041546 ClpA/ClpB_AAA_lid 460 562
IPR004176 Clp_R_dom 139 187
IPR004176 Clp_R_dom 212 263
IPR003959 ATPase_AAA_core 718 886
IPR019489 Clp_ATPase_C 893 971
IPR003959 ATPase_AAA_core 322 452
No external refs found!