Ppi_g52860 (ATVLN3, VLN3)

Aliases : ATVLN3, VLN3

Description : villin actin-crosslinking factor & original description: none

Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g52860

Target	Alias	Description	ECC score	Gene Family Method
AT2G29890	VLN1, ATVLN1	villin-like 1	0.03	OrthoFinder output from all 47 species
AT2G41740	ATVLN2, VLN2	villin 2	0.02	OrthoFinder output from all 47 species
Aop_g38086	VLN4, ATVLN4	villin actin-crosslinking factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g02316	VLN4, ATVLN4	villin actin-crosslinking factor & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g05233	VLN4, ATVLN4	villin actin-crosslinking factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10279989g0010	ATVLN3, VLN3	villin actin-crosslinking factor	0.02	OrthoFinder output from all 47 species
Sam_g27985	No alias	villin actin-crosslinking factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e031068_P001	VLN1, ATVLN1,...	villin actin-crosslinking factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	IEA	Interproscan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003128	Villin_headpiece	783	818
IPR007123	Gelsolin-like_dom	29	111
IPR007123	Gelsolin-like_dom	616	683
IPR007123	Gelsolin-like_dom	509	557
IPR007123	Gelsolin-like_dom	393	468
IPR007123	Gelsolin-like_dom	264	325
IPR007123	Gelsolin-like_dom	149	198

External Links

No external refs found!