Zm00001d032806 (GRMZM2G472060)


Aliases : GRMZM2G472060

Description : 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases Pectin lyase-like superfamily protein


Gene families : OG_01_0000238 (Gene family) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d032806
Cluster HCCA cluster: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT1G67750 No alias Pectate lyase family protein 0.04 Gene family
AT4G24780 No alias Pectin lyase-like superfamily protein 0.04 Gene family
GSVIVT01016208001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
MA_103716g0010 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
MA_91467g0010 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Solyc02g067450.3.1 Solyc02g067450.3 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc02g087670.3.1 Solyc02g087670.3 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc03g071570.3.1 Solyc03g071570.3 10.6.3 cell wall.degradation.pectate lyases and... 0.06 Gene family
Solyc05g055510.3.1 Solyc05g055510.3 10.6.3 cell wall.degradation.pectate lyases and... 0.04 Gene family
Solyc09g008380.3.1 Solyc09g008380.3 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc11g008140.2.1 Solyc11g008140.2 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002022 Pec_lyase 106 275
No external refs found!