Ppi_g52616

Description : regulatory factor *(NRT3) of nitrate uptake system & original description: none

Gene families : OG0001863 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001863_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g52616
Cluster	HCCA: Cluster_292

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00049p00207930	ATNRT3.1,...	Nutrient uptake.nitrogen assimilation.nitrate uptake...	0.03	OrthoFinder output from all 47 species
AMTR_s00174p00057530	ATNRT3.1,...	Nutrient uptake.nitrogen assimilation.nitrate uptake...	0.02	OrthoFinder output from all 47 species
Als_g45100	ATNRT3.1, NRT3.1, WR3	regulatory factor *(NRT3) of nitrate uptake system &...	0.03	OrthoFinder output from all 47 species
Als_g47506	ATNRT3.1, NRT3.1, WR3	regulatory factor *(NRT3) of nitrate uptake system &...	0.03	OrthoFinder output from all 47 species
Cba_g07156	No alias	regulatory factor *(NRT3) of nitrate uptake system &...	0.04	OrthoFinder output from all 47 species
Ceric.04G014600.1	ATNRT3.1,...	regulatory factor *(NRT3) of nitrate uptake system &...	0.03	OrthoFinder output from all 47 species
Ceric.10G072700.1	ATNRT3.1,...	regulatory factor *(NRT3) of nitrate uptake system &...	0.03	OrthoFinder output from all 47 species
Ceric.27G020500.1	ATNRT3.1,...	regulatory factor *(NRT3) of nitrate uptake system &...	0.04	OrthoFinder output from all 47 species
Dac_g40791	No alias	regulatory factor *(NRT3) of nitrate uptake system &...	0.03	OrthoFinder output from all 47 species
Dde_g42224	ATNRT3.1, NRT3.1, WR3	regulatory factor *(NRT3) of nitrate uptake system &...	0.03	OrthoFinder output from all 47 species
Gb_07108	ATNRT3.1, NRT3.1, WR3	regulatory factor NRT3 of nitrate uptake system	0.02	OrthoFinder output from all 47 species
Gb_07111	ATNRT3.1, NRT3.1, WR3	regulatory factor NRT3 of nitrate uptake system	0.03	OrthoFinder output from all 47 species
LOC_Os02g38230.1	ATNRT3.1,...	regulatory factor NRT3 of nitrate uptake system	0.04	OrthoFinder output from all 47 species
LOC_Os04g40410.1	ATNRT3.1,...	regulatory factor NRT3 of nitrate uptake system	0.03	OrthoFinder output from all 47 species
MA_11774g0010	ATNRT3.1, NRT3.1, WR3	regulatory factor NRT3 of nitrate uptake system	0.02	OrthoFinder output from all 47 species
Mp4g16300.1	No alias	regulatory factor NRT3 of nitrate uptake system	0.03	OrthoFinder output from all 47 species
Mp4g22660.1	ATNRT3.1, NRT3.1, WR3	regulatory factor NRT3 of nitrate uptake system	0.02	OrthoFinder output from all 47 species
Mp4g22690.1	No alias	regulatory factor NRT3 of nitrate uptake system	0.03	OrthoFinder output from all 47 species
Mp4g22710.1	ATNRT3.1, NRT3.1, WR3	regulatory factor NRT3 of nitrate uptake system	0.05	OrthoFinder output from all 47 species
Mp4g22730.1	ATNRT3.1, NRT3.1, WR3	regulatory factor NRT3 of nitrate uptake system	0.04	OrthoFinder output from all 47 species
Mp4g22750.1	ATNRT3.1, NRT3.1, WR3	regulatory factor NRT3 of nitrate uptake system	0.04	OrthoFinder output from all 47 species
Nbi_g34475	ATNRT3.1, NRT3.1, WR3	regulatory factor *(NRT3) of nitrate uptake system &...	0.06	OrthoFinder output from all 47 species
Pir_g06913	No alias	regulatory factor *(NRT3) of nitrate uptake system &...	0.02	OrthoFinder output from all 47 species
Pir_g36671	ATNRT3.1, NRT3.1, WR3	regulatory factor *(NRT3) of nitrate uptake system &...	0.03	OrthoFinder output from all 47 species
Ppi_g21552	ATNRT3.1, NRT3.1, WR3	regulatory factor *(NRT3) of nitrate uptake system &...	0.05	OrthoFinder output from all 47 species
Zm00001e015013_P001	ATNRT3.1,...	regulatory factor NRT3 of nitrate uptake system	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010167	response to nitrate	IEA	Interproscan
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transmembrane transport	IEA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098661	inorganic anion transmembrane transport	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004451	isocitrate lyase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016833	oxo-acid-lyase activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016605	Transptr_NO3_Nar2	29	169

External Links

No external refs found!

Ppi_g52616

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation