Zm00001d032748 (GRMZM2G001850, GRMZM5G860498)

Aliases : GRMZM2G001850, GRMZM5G860498

Description : protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs Encodes ATNUC-L1 (NUCLEOLIN LIKE 1), the predominant form of the two nucleolin proteins found in Arabidopsis. This protein is involved in rRNA processing, ribosome biosynthesis, and vascular pattern formation. PARL1 localizes to the nucleolus and parl1 mutants accumulate elevated levels of the unspliced 35S pre-rRNA. parl1 mutants also have defects in cotyledon, leaf, sepal, and petal vein patterning and have reduced stature, reduced fertility, increased bushiness, and reduced root length. The sugar-induced expression of ribosome proteins is also reduced in parl1 mutants. nucleolin like 1 (NUC-L1)

Gene families : OG_01_0004494 (Gene family) Phylogenetic Tree(s): OG0004494_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d032748
Cluster HCCA cluster: Cluster_346

Target Alias Description ECC score Gene Family Method Actions
AT1G48920 PARL1, ATNUC-L1, NUC-L1 nucleolin like 1 0.14 Gene family
Cre06.g275100 No alias protein.synthesis.ribosome... 0.06 Gene family
GSVIVT01012042001 No alias 30.5 signalling.G-proteins Encodes ATNUC-L2 (NUCLEOLIN... 0.07 Gene family
LOC_Os04g52960 Os04g0620700 protein.synthesis.ribosome... 0.21 Gene family
LOC_Os08g09350 Os08g0192900 protein.synthesis.ribosome... 0.08 Gene family
MA_10433238g0010 No alias protein.synthesis.ribosome... 0.04 Gene family
Smo234317 PACid_15402332 No description available 0.09 Gene family
Solyc02g014310.3.1 Solyc02g014310.3 30.5 signalling.G-proteins Encodes ATNUC-L1 (NUCLEOLIN... 0.11 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 627 682
IPR000504 RRM_dom 497 565
No external refs found!