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  5. Aev_g13057

Aev_g13057 (PSBR)


Aliases : PSBR

Description : component *(PsbR) of PS-II complex & original description: none


Gene families : OG0002211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g13057
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AT1G79040 PSBR photosystem II subunit R 0.02 OrthoFinder output from all 47 species
Als_g05205 PSBR component *(PsbR) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g29630 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37382.t1 PSBR, Aspi01Gene37382 component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02302 PSBR component *(PsbR) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.20G086200.1 PSBR, Ceric.20G086200 component *(PsbR) of PS-II complex & original... 0.06 OrthoFinder output from all 47 species
Dac_g12213 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32722 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25420 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00341 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22404 PSBR component *(PsbR) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01020484001 PSBR Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 OrthoFinder output from all 47 species
Gb_04149 PSBR component PsbR of PS-II complex 0.03 OrthoFinder output from all 47 species
LOC_Os08g10020.1 PSBR, LOC_Os08g10020 component PsbR of PS-II complex 0.05 OrthoFinder output from all 47 species
Len_g00088 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g38512 PSBR component *(PsbR) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
MA_282g0010 PSBR component PsbR of PS-II complex 0.05 OrthoFinder output from all 47 species
Mp3g05840.1 PSBR component PsbR of PS-II complex 0.07 OrthoFinder output from all 47 species
Msp_g02196 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40620 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06143 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09918 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01588 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024344 PSBR component *(PsbR) of PS-II complex & original... 0.05 OrthoFinder output from all 47 species
Sam_g12723 No alias component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g066310.3.1 PSBR, Solyc07g066310 component PsbR of PS-II complex 0.02 OrthoFinder output from all 47 species
Spa_g03368 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g07988 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0042651 thylakoid membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006814 PSII_PsbR 50 147
No external refs found!