Ppi_g50366 (UBQ6)

Aliases : UBQ6

Description : not classified & original description: none

Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g50366

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021318.73	UBQ10	Protein degradation.peptide tagging.Ubiquitin...	0.01	OrthoFinder output from all 47 species
Ehy_g25908	UBQ5	component *(eS31) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Ehy_g29490	RUB1, ATRUB1, NEDD8	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Mp8g11720.1	RUB1, ATRUB1, NEDD8	Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Sam_g02652	No alias	component *(eS31) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Sam_g05951	No alias	component *(eS31) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Sam_g25855	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002906	Ribosomal_S27a	27	70

External Links

No external refs found!

Ppi_g50366 (UBQ6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation