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  5. Ppi_g50278

Ppi_g50278


Description : not classified & original description: none


Gene families : OG0001648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001648_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g50278

Target Alias Description ECC score Gene Family Method Actions
Aob_g35778 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ceric.06G075100.1 RPS18A, PFL,... component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01017975001 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01034582001 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
MA_10429265g0010 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.01 OrthoFinder output from all 47 species
Mp1g07420.1 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.01 OrthoFinder output from all 47 species
Msp_g30950 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Msp_g38967 RPS18A, PFL, PFL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05557 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Sam_g32254 No alias component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Solyc03g078290.3.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc06g073370.4.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc11g005680.2.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!