Ppi_g49939

Description : component *(eL34) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000940_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g49939
Cluster	HCCA: Cluster_187

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00260730	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
AT1G69620	RPL34	ribosomal protein L34	0.02	OrthoFinder output from all 47 species
Aob_g25976	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0045.g029897	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cre16.g661050	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Dac_g02443	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ehy_g19232	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Gb_36060	No alias	component RPL34 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Lfl_g31825	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Mp4g17040.1	No alias	component RPL34 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Pp3c11_2940V3.1	RPL34, Pp3c11_2940	Ribosomal protein L34e superfamily protein	0.02	OrthoFinder output from all 47 species
Pp3c2_34570V3.1	Pp3c2_34570	Ribosomal protein L34e superfamily protein	0.01	OrthoFinder output from all 47 species
Sam_g20232	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Smo113433	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Solyc06g069860.4.1	Solyc06g069860	component RPL34 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Zm00001e022460_P001	Zm00001e022460	component RPL34 of LSU proteome component	0.01	OrthoFinder output from all 47 species
Zm00001e040229_P001	Zm00001e040229	component RPL34 of LSU proteome component	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006643	membrane lipid metabolic process	IEP	HCCA
BP	GO:0006665	sphingolipid metabolic process	IEP	HCCA
BP	GO:0006672	ceramide metabolic process	IEP	HCCA
BP	GO:0006801	superoxide metabolic process	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008195	Ribosomal_L34Ae	1	93

External Links

No external refs found!

Ppi_g49939

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation