Ppi_g49410


Description : not classified & original description: none


Gene families : OG0005617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005617_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g49410

Target Alias Description ECC score Gene Family Method Actions
Adi_g014392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56987 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene19999.t1 Aspi01Gene19999 mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0080.g038478 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.02 OrthoFinder output from all 47 species
Cba_g04670 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Ceric.08G062900.1 Ceric.08G062900 mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species
Dac_g45786 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g11869 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.07 OrthoFinder output from all 47 species
Dde_g06863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12116 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g34233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05269 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.02 OrthoFinder output from all 47 species
Pir_g14452 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s3707.g028947 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.02 OrthoFinder output from all 47 species
Spa_g04254 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 535 562
IPR002885 Pentatricopeptide_repeat 499 528
IPR002885 Pentatricopeptide_repeat 465 491
IPR033443 PPR_long 261 413
IPR002885 Pentatricopeptide_repeat 600 647
No external refs found!