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  5. AMTR_s00089p00083270

AMTR_s00089p00083270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00089.37

Description : Protein UPSTREAM OF FLC OS=Arabidopsis thaliana


Gene families : OG_01_0001036 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001036_tree ,
OG_02_0000624 (LandPlants) Phylogenetic Tree(s): OG_02_0000624_tree ,
OG_03_0000863 (SeedPlants) Phylogenetic Tree(s): OG_03_0000863_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00089p00083270
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AT2G28150 No alias Domain of unknown function (DUF966) 0.05 Archaeplastida
GSVIVT01005997001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031468001 No alias No description available 0.04 Archaeplastida
GSVIVT01031469001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os03g48600.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.09 Archaeplastida
LOC_Os08g44760.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_10435302g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_3651g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc06g075690.3.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc11g066380.3.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e003892_P002 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e022043_P001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.07 Archaeplastida
AT2G28150 No alias Domain of unknown function (DUF966) 0.05 LandPlants
AT5G59790 No alias Domain of unknown function (DUF966) 0.02 LandPlants
GSVIVT01031468001 No alias No description available 0.04 LandPlants
GSVIVT01031469001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.03 LandPlants
Gb_03666 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 LandPlants
LOC_Os03g48600.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.08 LandPlants
LOC_Os08g44760.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.06 LandPlants
MA_10435302g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 LandPlants
Solyc11g066380.3.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.05 LandPlants
Zm00001e003892_P002 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 LandPlants
Zm00001e022043_P001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.07 LandPlants
AT2G28150 No alias Domain of unknown function (DUF966) 0.04 SeedPlants
AT5G59790 No alias Domain of unknown function (DUF966) 0.02 SeedPlants
GSVIVT01031468001 No alias No description available 0.03 SeedPlants
GSVIVT01031469001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.03 SeedPlants
Gb_03666 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.01 SeedPlants
LOC_Os03g48600.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.06 SeedPlants
LOC_Os08g44760.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 SeedPlants
Solyc11g066380.3.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 SeedPlants
Zm00001e022043_P001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.07 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010369 SOK2_plant 34 390
No external refs found!