Aliases : ATLIG1, LIG1
Description : EC_6.5 ligase forming phosphoric ester bond & original description: none
Gene families : OG0001904 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001904_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g109165 | AtLIG6, LIG6 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g01376 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g38330 | AtLIG6, LIG6 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.28G053000.1 | ATLIG1, LIG1,... | EC_6.5 ligase forming phosphoric ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000754.31 | ATLIG1, LIG1 | DNA ligase 1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cre07.g325716 | ATLIG1, LIG1 | DNA damage response.DNA repair mechanisms.base excision... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01031470001 | ATLIG1, LIG1 | DNA damage response.DNA repair mechanisms.base excision... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g34750.1 | ATLIG1, LIG1,... | DNA replication DNA ligase (LIG1). DNA ligase (LIG1) | 0.04 | OrthoFinder output from all 47 species | |
Len_g30745 | AtLIG6, LIG6 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g44192 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e004508_P002 | ATLIG1, LIG1,... | DNA replication DNA ligase (LIG1). DNA ligase (LIG1) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003910 | DNA ligase (ATP) activity | IEA | Interproscan |
BP | GO:0006281 | DNA repair | IEA | Interproscan |
BP | GO:0006310 | DNA recombination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1903293 | phosphatase complex | IEP | HCCA |
No external refs found! |