Ppi_g48435 (RNR1, ATMTRNASEII, EMB2730)

Aliases : RNR1, ATMTRNASEII, EMB2730

Description : exoribonuclease *(RNase R) & original description: none

Gene families : OG0003116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003116_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g48435

Target	Alias	Description	ECC score	Gene Family Method
Als_g08385	RNR1,...	exoribonuclease *(RNase R) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.16G035800.1	RNR1,...	exoribonuclease *(RNase R) & original description:...	0.02	OrthoFinder output from all 47 species
Dcu_g15021	RNR1,...	exoribonuclease *(RNase R) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g26128	RNR1,...	exoribonuclease *(RNase R) & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014701	RNR1,...	exoribonuclease *(RNase R) & original description: CDS=112-2388	0.02	OrthoFinder output from all 47 species
Sam_g18624	No alias	exoribonuclease *(RNase R) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004540	ribonuclease activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001900	RNase_II/R	391	685

External Links

No external refs found!