Description : component *(RPP2) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000215_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g47734 | |
Cluster | HCCA: Cluster_94 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G44590 | No alias | 60S acidic ribosomal protein family | 0.03 | OrthoFinder output from all 47 species | |
Aop_g29386 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g28150 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g50883 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.02G042100.1 | Ceric.02G042100 | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Cre02.g143050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g28530 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g32367 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g43526 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g44019 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g16099 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01034757001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
Gb_39007 | No alias | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Mp1g06260.1 | No alias | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Mp1g08160.1 | No alias | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g22542 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Pp3c1_27060V3.1 | Pp3c1_27060 | 60S acidic ribosomal protein family | 0.01 | OrthoFinder output from all 47 species | |
Sam_g00046 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g07570 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g23353 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g23854 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g40093 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g009447.1.1 | Solyc01g009447 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Spa_g37475 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Spa_g39239 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e006597_P001 | Zm00001e006597 | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e026591_P001 | Zm00001e026591 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026592_P001 | Zm00001e026592 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026593_P001 | Zm00001e026593 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e041900_P001 | Zm00001e041900 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
MF | GO:0015252 | proton channel activity | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |