Aev_g12706 (RCA)

Aliases : RCA

Description : ATP-dependent activase involved in RuBisCo regulation & original description: none

Gene families : OG0000137 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g12706

Target	Alias	Description	ECC score	Gene Family Method
AT2G39730	RCA	rubisco activase	0.01	OrthoFinder output from all 39 species
Adi_g007841	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Adi_g056176	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Adi_g060599	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Adi_g079810	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Adi_g126773	RCA	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Ala_g04126	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Ala_g06980	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Als_g03717	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Aob_g16411	RCA	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Aop_g07488	No alias	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Aop_g12628	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Azfi_s0001.g000197	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Azfi_s0007.g011067	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Cba_g02574	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Cba_g15232	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 39 species
Cba_g69697	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Ceric.12G094300.1	RCA, Ceric.12G094300	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Ceric.12G094500.1	RCA, Ceric.12G094500	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Ceric.12G094700.1	RCA, Ceric.12G094700	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Ceric.12G094800.1	RCA, Ceric.12G094800	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Ceric.28G001900.1	RCA, Ceric.28G001900	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Ceric.28G002100.1	RCA, Ceric.28G002100	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Dac_g08800	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Dac_g13179	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Dac_g23489	No alias	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Dcu_g18051	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Dcu_g42046	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Dde_g08345	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Dde_g09720	No alias	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Dde_g12618	No alias	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Dde_g18636	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Dde_g29373	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Dde_g47250	No alias	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Ehy_g03611	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Ehy_g15758	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
GSVIVT01024910001	RCA	Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat...	0.01	OrthoFinder output from all 39 species
Len_g17744	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Len_g24593	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Lfl_g05580	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 39 species
Lfl_g10261	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Mp3g03990.1	RCA	ATP-dependent activase involved in RuBisCo regulation	0.01	OrthoFinder output from all 39 species
Msp_g06782	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 39 species
Msp_g10333	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Nbi_g09928	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Nbi_g20650	RCA	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Nbi_g25439	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Nbi_g28724	RCA	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Ore_g20242	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Pir_g08208	RCA	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Pir_g23735	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Pir_g64092	RCA	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Pnu_g24705	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Ppi_g15847	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Ppi_g21034	No alias	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Ppi_g23659	RCA	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Ppi_g29886	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Sam_g09791	No alias	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Sam_g28274	No alias	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Sam_g38765	No alias	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Smo268623	RCA	Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat...	0.01	OrthoFinder output from all 39 species
Smo79425	No alias	Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat...	0.01	OrthoFinder output from all 39 species
Spa_g05667	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Spa_g05668	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 39 species
Spa_g15054	No alias	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Spa_g29802	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Tin_g07636	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.01	OrthoFinder output from all 39 species
Tin_g18125	No alias	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Tin_g44679	No alias	not classified & original description: none	0.01	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009538	photosystem I reaction center	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0010109	regulation of photosynthesis	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
MF	GO:0010242	oxygen evolving activity	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016854	racemase and epimerase activity	IEP	HCCA
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0042549	photosystem II stabilization	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	168	310

External Links

No external refs found!

Aev_g12706 (RCA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation