Aliases : IDD2, AtIDD2
Description : C2H2 subclass IDD transcription factor & original description: none
Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g47248 | |
Cluster | HCCA: Cluster_148 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00061550 | JKD,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00032p00120910 | IDD4, AtIDD4,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
Als_g18228 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g22280 | IDD2, AtIDD2 | C2H2 subclass IDD transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0004.g008481 | IDD16, AtIDD16 | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g17110 | No alias | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01010283001 | IDD5, AtIDD5 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.05 | OrthoFinder output from all 47 species | |
Len_g03355 | MGP | C2H2 subclass IDD transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g09565 | MGP | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g08806 | IDD14, AtIDD14 | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g065670.3.1 | MGP, Solyc09g065670 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | HCCA |
BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | HCCA |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022755 | Znf_C2H2_jaz | 48 | 70 |
No external refs found! |