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  5. Ppi_g46819

Ppi_g46819


Description : not classified & original description: none


Gene families : OG0005742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005742_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g46819
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Dac_g29071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g36071 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g41256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43205 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR021870 MVP_shoulder 506 623
IPR040989 Vault_3 444 505
IPR041139 MVP_rep_dom 323 363
IPR041139 MVP_rep_dom 166 206
IPR041139 MVP_rep_dom 219 261
IPR041139 MVP_rep_dom 113 153
IPR041134 Vault_2 49 109
IPR041134 Vault_2 272 319
IPR041136 Vault_4 374 425
No external refs found!