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  5. Ppi_g46349

Ppi_g46349


Description : E3 ubiquitin ligase *(SR1) & original description: none


Gene families : OG0001832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001832_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g46349

Target Alias Description ECC score Gene Family Method Actions
Aob_g05330 No alias E3 ubiquitin ligase *(SR1) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.80 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.01 OrthoFinder output from all 47 species
Dac_g14529 No alias E3 ubiquitin ligase *(SR1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21758 No alias E3 ubiquitin ligase *(SR1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_137330g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g15270 No alias E3 ubiquitin ligase *(SR1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!