Description : NUP98 nucleoporin of nuclear pore complex
Gene families : OG_01_0001288 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001288_tree ,
OG_02_0003828 (LandPlants) Phylogenetic Tree(s): OG_02_0003828_tree ,
OG_03_0003888 (SeedPlants) Phylogenetic Tree(s): OG_03_0003888_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os12g06890.1 | |
Cluster | HCCA: Cluster_376 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre02.g086887 | No alias | Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
Gb_29033 | No alias | NUP96 scaffold nucleoporin of nuclear pore complex | 0.02 | Archaeplastida | |
MA_10434126g0020 | No alias | NUP96 scaffold nucleoporin of nuclear pore complex | 0.03 | Archaeplastida | |
MA_62342g0010 | No alias | NUP98 nucleoporin of nuclear pore complex | 0.03 | Archaeplastida | |
Solyc04g007280.3.1 | No alias | NUP98 nucleoporin of nuclear pore complex | 0.07 | Archaeplastida | |
Zm00001e020801_P003 | No alias | NUP98 nucleoporin of nuclear pore complex | 0.03 | Archaeplastida | |
Zm00001e038897_P001 | No alias | NUP96 scaffold nucleoporin of nuclear pore complex | 0.02 | Archaeplastida | |
MA_62342g0010 | No alias | NUP98 nucleoporin of nuclear pore complex | 0.02 | LandPlants | |
Solyc04g007280.3.1 | No alias | NUP98 nucleoporin of nuclear pore complex | 0.06 | LandPlants | |
Zm00001e020801_P003 | No alias | NUP98 nucleoporin of nuclear pore complex | 0.03 | LandPlants | |
Solyc04g007280.3.1 | No alias | NUP98 nucleoporin of nuclear pore complex | 0.05 | SeedPlants | |
Zm00001e020801_P003 | No alias | NUP98 nucleoporin of nuclear pore complex | 0.02 | SeedPlants |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005643 | nuclear pore | IEA | Interproscan |
BP | GO:0006913 | nucleocytoplasmic transport | IEA | Interproscan |
MF | GO:0017056 | structural constituent of nuclear pore | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007230 | Peptidase_S59 | 782 | 928 |
No external refs found! |