LOC_Os12g06810.1


Description : Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii (sp|q3y8l7|daw1_chlre : 95.9)


Gene families : OG_01_0003330 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003330_tree ,
OG_02_0004653 (LandPlants) Phylogenetic Tree(s): OG_02_0004653_tree ,
OG_03_0005873 (SeedPlants) Phylogenetic Tree(s): OG_03_0005873_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g06810.1
Cluster HCCA: Cluster_347

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00083820 evm_27.TU.AmTr_v1... Dynein assembly factor with WDR repeat domains 1... 0.03 Archaeplastida
AT3G05090 LRS1 Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
MA_18695g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_555156g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Smo139346 No alias Dynein assembly factor with WDR repeat domains 1... 0.02 Archaeplastida
Solyc01g098090.3.1 No alias Dynein assembly factor with WDR repeat domains 1... 0.08 Archaeplastida
Zm00001e018453_P003 No alias Dynein assembly factor with WDR repeat domains 1... 0.04 Archaeplastida
Zm00001e039445_P001 No alias Dynein assembly factor with WDR repeat domains 1... 0.06 Archaeplastida
AMTR_s00030p00083820 evm_27.TU.AmTr_v1... Dynein assembly factor with WDR repeat domains 1... 0.03 LandPlants
AT3G05090 LRS1 Transducin/WD40 repeat-like superfamily protein 0.04 LandPlants
MA_555156g0010 No alias no hits & (original description: none) 0.05 LandPlants
Solyc01g098090.3.1 No alias Dynein assembly factor with WDR repeat domains 1... 0.07 LandPlants
Zm00001e018453_P003 No alias Dynein assembly factor with WDR repeat domains 1... 0.04 LandPlants
Zm00001e039445_P001 No alias Dynein assembly factor with WDR repeat domains 1... 0.05 LandPlants
AMTR_s00030p00083820 evm_27.TU.AmTr_v1... Dynein assembly factor with WDR repeat domains 1... 0.03 SeedPlants
AT3G05090 LRS1 Transducin/WD40 repeat-like superfamily protein 0.02 SeedPlants
MA_555156g0010 No alias no hits & (original description: none) 0.05 SeedPlants
Solyc01g098090.3.1 No alias Dynein assembly factor with WDR repeat domains 1... 0.07 SeedPlants
Solyc08g023590.4.1 No alias Coatomer subunit alpha-2 OS=Arabidopsis thaliana... 0.02 SeedPlants
Zm00001e018453_P003 No alias Dynein assembly factor with WDR repeat domains 1... 0.04 SeedPlants
Zm00001e039445_P001 No alias Dynein assembly factor with WDR repeat domains 1... 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021772 WDR48/Bun107 601 747
IPR001680 WD40_repeat 78 110
IPR001680 WD40_repeat 115 154
IPR001680 WD40_repeat 248 283
IPR001680 WD40_repeat 34 67
IPR001680 WD40_repeat 288 323
IPR001680 WD40_repeat 210 241
No external refs found!