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Description : Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana (sp|q8vyh0|pp313_arath : 479.0)
Gene families : OG_01_0012910 (Archaeplastida) Phylogenetic Tree(s): OG_01_0012910_tree ,
OG_02_0012049 (LandPlants) Phylogenetic Tree(s): OG_02_0012049_tree ,
OG_03_0012871 (SeedPlants) Phylogenetic Tree(s): OG_03_0012871_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os12g06650.1 | |
| Cluster | HCCA: Cluster_52 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00057p00199190 | No alias | Pentatricopeptide repeat-containing protein At4g15720... | 0.03 | Archaeplastida | |
| GSVIVT01017763001 | No alias | Pentatricopeptide repeat-containing protein At4g15720... | 0.06 | Archaeplastida | |
| AMTR_s00057p00199190 | No alias | Pentatricopeptide repeat-containing protein At4g15720... | 0.04 | LandPlants | |
| GSVIVT01017763001 | No alias | Pentatricopeptide repeat-containing protein At4g15720... | 0.11 | LandPlants | |
| Smo101455 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | LandPlants | |
| AMTR_s00057p00199190 | No alias | Pentatricopeptide repeat-containing protein At4g15720... | 0.04 | SeedPlants | |
| GSVIVT01017763001 | No alias | Pentatricopeptide repeat-containing protein At4g15720... | 0.06 | SeedPlants |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 76 | 124 |
| IPR032867 | DYW_dom | 458 | 594 |
| IPR002885 | Pentatricopeptide_repeat | 287 | 315 |
| IPR002885 | Pentatricopeptide_repeat | 151 | 174 |
| IPR002885 | Pentatricopeptide_repeat | 325 | 348 |
| IPR002885 | Pentatricopeptide_repeat | 182 | 211 |
| IPR002885 | Pentatricopeptide_repeat | 429 | 454 |
| No external refs found! |