LOC_Os12g05080.1


Description : rhamnogalacturonan-I O-acetyltransferase (TBL)


Gene families : OG_01_0000059 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000059_tree ,
OG_02_0001499 (LandPlants) Phylogenetic Tree(s): OG_02_0001499_tree ,
OG_03_0001415 (SeedPlants) Phylogenetic Tree(s): OG_03_0001415_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g05080.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00125740 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00114p00129910 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 8 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT3G54260 TBL36 TRICHOME BIREFRINGENCE-LIKE 36 0.03 Archaeplastida
Pp3c5_27320V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.01 Archaeplastida
Pp3c6_110V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.02 Archaeplastida
Solyc01g079850.3.1 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.01 Archaeplastida
Solyc06g051350.4.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e006156_P001 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Zm00001e038331_P001 No alias Protein trichome birefringence-like 6 OS=Arabidopsis... 0.04 Archaeplastida
AMTR_s00114p00129910 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 8 OS=Arabidopsis thaliana 0.02 LandPlants
MA_7200g0010 No alias Protein trichome birefringence-like 11 OS=Arabidopsis... 0.01 LandPlants
Solyc01g079850.3.1 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.01 LandPlants
Solyc01g079850.3.1 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 86 139
IPR026057 PC-Esterase 140 428
No external refs found!