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  5. Ppi_g44117

Ppi_g44117 (EMB976)


Aliases : EMB976

Description : plastidial splicing factor *(PDM4) & original description: none


Gene families : OG0007469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g44117
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Gb_06359 RARE1 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Spa_g06898 EMB976 plastidial splicing factor *(PDM4) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 196 224
IPR002885 Pentatricopeptide_repeat 475 504
IPR002885 Pentatricopeptide_repeat 404 433
IPR002885 Pentatricopeptide_repeat 370 399
IPR002885 Pentatricopeptide_repeat 583 605
IPR002885 Pentatricopeptide_repeat 300 328
IPR002885 Pentatricopeptide_repeat 334 364
IPR002885 Pentatricopeptide_repeat 545 573
IPR002885 Pentatricopeptide_repeat 231 256
IPR002885 Pentatricopeptide_repeat 450 469
No external refs found!