Ppi_g44052


Description : component *(eL21) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g44052
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AT1G09590 No alias Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
AT1G09690 No alias Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Cba_g68360 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.10G032200.1 Ceric.10G032200 component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cre06.g278135 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dac_g25425 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01001130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os03g04750.1 LOC_Os03g04750 component RPL21 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp6g01390.1 No alias component RPL21 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Pp3c12_9320V3.1 Pp3c12_9320 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Pp3c13_2360V3.1 Pp3c13_2360 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Pp3c3_5550V3.1 Pp3c3_5550 Translation protein SH3-like family protein 0.01 OrthoFinder output from all 47 species
Pp3c4_21520V3.1 Pp3c4_21520 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Sam_g38886 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e000341_P001 Zm00001e000341 component RPL21 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e012727_P001 Zm00001e012727 component RPL21 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 1 101
No external refs found!