- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : bHLH-type transcription factor & original description: none
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g43879 | |
| Cluster | HCCA: Cluster_73 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G05805 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G43010 | SRL2, PIF4, AtPIF4 | phytochrome interacting factor 4 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G59060 | PIL6, PIF5 | phytochrome interacting factor 3-like 6 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g25222 | LRL3 | bHLH-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g25486 | ATRSL1, RSL1 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01013553001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01037846001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g46370.1 | LOC_Os05g46370 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g38961 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g11900.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g007430.2.1 | PIF3, POC1,... | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g043580.4.1 | PIL6, PIF5,... | transcription factor (bHLH). PIF red/far-red light... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e005046_P003 | PIL5, PIF1,... | transcription factor (bHLH). PIF red/far-red light... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034528_P001 | Zm00001e034528 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 417 | 463 |
| No external refs found! |