LOC_Os12g04000.1


Description : auxin transporter (PIN). auxin efflux transporter (PIN)


Gene families : OG_01_0000353 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000353_tree ,
OG_02_0000237 (LandPlants) Phylogenetic Tree(s): OG_02_0000237_tree ,
OG_03_0000465 (SeedPlants) Phylogenetic Tree(s): OG_03_0000465_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g04000.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00137670 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
AMTR_s00013p00241000 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
AMTR_s00101p00149240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
AT1G73590 ATPIN1, PIN1 Auxin efflux carrier family protein 0.04 Archaeplastida
AT1G77110 PIN6 Auxin efflux carrier family protein 0.03 Archaeplastida
AT2G01420 ATPIN4, PIN4 Auxin efflux carrier family protein 0.03 Archaeplastida
GSVIVT01010025001 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
GSVIVT01011755001 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
GSVIVT01011756001 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
GSVIVT01025748001 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
GSVIVT01025749001 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
GSVIVT01029266001 No alias Solute transport.carrier-mediated transport.BART... 0.05 Archaeplastida
Gb_02144 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
MA_69724g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Mp3g21660.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Pp3c10_24880V3.1 No alias Auxin efflux carrier family protein 0.05 Archaeplastida
Pp3c23_10200V3.1 No alias Auxin efflux carrier family protein 0.05 Archaeplastida
Pp3c24_2970V3.1 No alias Auxin efflux carrier family protein 0.05 Archaeplastida
Smo102666 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
Smo234325 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
Solyc02g087660.4.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Solyc03g118740.3.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Solyc10g078370.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.1 Archaeplastida
Solyc10g080880.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 Archaeplastida
Zm00001e010118_P004 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Zm00001e018835_P004 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Zm00001e024071_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.1 Archaeplastida
Zm00001e036089_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 Archaeplastida
AMTR_s00010p00137670 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.02 LandPlants
AMTR_s00013p00241000 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.02 LandPlants
AMTR_s00019p00250330 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.02 LandPlants
AMTR_s00101p00149240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.03 LandPlants
AT1G73590 ATPIN1, PIN1 Auxin efflux carrier family protein 0.04 LandPlants
AT1G77110 PIN6 Auxin efflux carrier family protein 0.02 LandPlants
AT2G01420 ATPIN4, PIN4 Auxin efflux carrier family protein 0.02 LandPlants
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.03 LandPlants
GSVIVT01008430001 No alias Solute transport.carrier-mediated transport.BART... 0.02 LandPlants
GSVIVT01010025001 No alias Solute transport.carrier-mediated transport.BART... 0.02 LandPlants
GSVIVT01011756001 No alias Solute transport.carrier-mediated transport.BART... 0.02 LandPlants
GSVIVT01025748001 No alias Solute transport.carrier-mediated transport.BART... 0.02 LandPlants
GSVIVT01025749001 No alias Solute transport.carrier-mediated transport.BART... 0.01 LandPlants
GSVIVT01029266001 No alias Solute transport.carrier-mediated transport.BART... 0.03 LandPlants
Gb_02144 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 LandPlants
Gb_06199 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
MA_69724g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
Mp3g21660.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
Pp3c10_24880V3.1 No alias Auxin efflux carrier family protein 0.03 LandPlants
Pp3c23_10200V3.1 No alias Auxin efflux carrier family protein 0.05 LandPlants
Pp3c24_2970V3.1 No alias Auxin efflux carrier family protein 0.05 LandPlants
Smo234325 No alias Solute transport.carrier-mediated transport.BART... 0.02 LandPlants
Solyc02g087660.4.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
Solyc03g118740.3.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
Solyc07g006900.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
Solyc10g078370.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.09 LandPlants
Solyc10g080880.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 LandPlants
Zm00001e024071_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.1 LandPlants
Zm00001e036089_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.08 LandPlants
AMTR_s00101p00149240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.03 SeedPlants
AT1G73590 ATPIN1, PIN1 Auxin efflux carrier family protein 0.03 SeedPlants
AT2G01420 ATPIN4, PIN4 Auxin efflux carrier family protein 0.02 SeedPlants
GSVIVT01008430001 No alias Solute transport.carrier-mediated transport.BART... 0.02 SeedPlants
GSVIVT01025748001 No alias Solute transport.carrier-mediated transport.BART... 0.03 SeedPlants
Gb_02144 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 SeedPlants
Gb_06199 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 SeedPlants
MA_69724g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 SeedPlants
Solyc03g118740.3.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 SeedPlants
Solyc10g078370.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.08 SeedPlants
Solyc10g080880.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 SeedPlants
Zm00001e020346_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 SeedPlants
Zm00001e024071_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.09 SeedPlants
Zm00001e036089_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004776 Mem_trans 1 385
No external refs found!